Fig. 5
From: Regulation of transcriptional homeostasis by DNA methylation upon genome duplication in pak choi
Functional prediction of DMGs and enrichment with DEGs. A Numbers of DMRs between Bc2X and Bc4X for the CG, CHG, and CHH sequence contexts. Red bars represent hyperDMRs, and blue bars represent hypoDMRs. B Numbers of DMGs between Bc2X and Bc4X for the CG, CHG, and CHH sequence contexts. C GO analysis of DMGs between Bc2X and Bc4X. D Venn diagram showing the overlaps between the DEGs (up/downregulated) and the DMGs (hyper/hypoDMGs). Significance was examined via the hypergeometric test. E Scatter plots showing the correlations between methylation and transcription differences of the significantly enriched genes in D. Statistical analysis was performed with two-tailed Student’s t tests